BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036B03LP1|AL430170
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig963 1795 0.0
>3x_Contig963
Length = 4018
Score = 1795 bits (905), Expect = 0.0
Identities = 925/929 (99%), Gaps = 2/929 (0%)
Strand = Plus / Minus
Query: 1 gatcaccaaggcaagttcacgcgattgttcgccattcaccgagatattaagatagaatag 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3223 gatcaccaaggcaagttcacgcgattgtacgccattcaccgagatattaagatagaatag 3164
Query: 61 atttgattaaattggaggagacaaaaataatggctcccctcatttttgttcttttacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3163 atttgattaaattggaggagacaaaaataatggctcccctcatttttgttcttttacctt 3104
Query: 121 gttgttcaaatggaataacagacagtgccaataaaggaaacctctacaaactactaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3103 gttgttcaaatggaataacagacagtgccaataaaggaaacctctacaaactactaagct 3044
Query: 181 atttgatcagagtccagatttaattactatagatcattggtacaaatgctttacattaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3043 atttgatcagagtccagatttaattactatagatcattggtacaaatgctttacattaac 2984
Query: 241 gttggacgaaaaacagaggtgaattgcactgactttcgcttaatctcgattggcactaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2983 gttggacgaaaaacagaggtgaattgcactgactttcgcttaatctcgattggcactaaa 2924
Query: 301 cgccttacttgagaggcgagacttattaagttcggcccatgtgttgtttacctctcttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2923 cgccttacttgagaggcgagacttattaagttcggcccatgtgttgtttacctctcttcc 2864
Query: 361 tgacgttggtagttggtgttatttcgggaacattccggacgtctgcatagttatctaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2863 tgacgttggtagttggtgttatttcgggaacattccggacgtctgcatagttatctaaga 2804
Query: 421 tcagacgtagtagcttccatttttcttctaacttgctcttgacattgatatcagttatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2803 tcagacgtagtagcttccatttttcttctaacttgctcttgacattgatatcagttatct 2744
Query: 481 gaccgttgatcaacatacagttattgaccgataaagaatccccgaagaatgtatggataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2743 gaccgttgatcaacatacagttattgaccgataaagaatccccgaagaatgtatggataa 2684
Query: 541 tattcgggttttgaaaacagaggaaatctgtatctcggcttaaaatgcatactctaacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2683 tattcgggttttgaaaacagaggaaatctgtatctcggcttaaaatgcatactctaacag 2624
Query: 601 gatacaacatggacggtgggtcgatcttttaacggcgca-cacgtgtgcatatgaaagaa 659
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 2623 gatacaacatggacggtgggtcgatcttttaacggcgcagcacgt-tgcatatgaaagaa 2565
Query: 660 tataatttttatcctctctcagaaattcgtgaagaagggcaaaagaggcctaatactcaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2564 tataatttttatcctctctcagaaattcgtgaagaagggcaaaagaggcctaatactcaa 2505
Query: 720 cctattatgcccgctataatccgcgttacgtccgatgaataagataatagcatcggacgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2504 cctattatgcccgctataatccgcgttacgtccgatgaataagataatagcatcggacgt 2445
Query: 780 kaggcaaaaatatcagatttgtaccctttcagtttttcctccaacattggtttggcaatc 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2444 aaggcaaaaatatcagatttgtaccctttcagtttttcctccaacattggtttggcaatc 2385
Query: 840 tgctaactctaaatcgaattttacaaggcatcttagttttgcatgctggcaaagtcaaca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2384 tgctaactctaaatcgaattttacaaggcatcttagttttgcatgctggcaaagtcaaca 2325
Query: 900 aataatccgccttttgaacttgcacgaac 928
|||||||||||||||||||||||||||||
Sbjct: 2324 aataatccgccttttgaacttgcacgaac 2296
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6228
Number of Sequences: 1807
Number of extensions: 6228
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)